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Bioinformatic Service for Next Generation Sequencing

At N2Jenomics Lab Pvt. Ltd., we provide comprehensive bioinformatics and statistical data analysis services to transform complex genomic datasets into meaningful biological insights. Our expert team helps researchers, clinicians, and biotechnology organizations interpret large-scale data generated from next-generation sequencing (NGS), third-generation sequencing, genotyping, and microarray experiments.

Bioinformatic Service for Next Generation Sequencing

Overview

Advancements in next-generation and long-read sequencing technologies have transformed modern biological and medical research by generating unprecedented volumes of genomic data. However, extracting meaningful insights requires robust analytical strategies, advanced computational tools, and experienced bioinformaticians.

N2Jenomics Lab Pvt. Ltd. offers end-to-end bioinformatics solutions covering every stage of sequencing and microarray data analysis. Our services support data generated from a wide range of genomics platforms, ensuring accurate processing, comprehensive interpretation, and publication-ready visualizations.

Using state-of-the-art bioinformatics pipelines, advanced statistical methods, and validated computational workflows, we deliver reliable, reproducible, and high-quality analytical results tailored to your research objectives.

Our multidisciplinary bioinformatics team comprises experienced scientists with expertise in genomics, bioinformatics, computational biology, statistics, and programming. By combining customized analytical pipelines with industry-standard and open-source tools, we provide comprehensive reports, publication-quality figures, and expert interpretation that help accelerate scientific discovery and decision-making.

Whether you are conducting basic research, clinical studies, agricultural genomics, or pharmaceutical research, our bioinformatics solutions are designed to maximize the value of your sequencing and microarray data.

 

Customized Bioinformatics Workflow

High-throughput sequencing and microarray technologies generate vast amounts of complex data with varying quality and experimental requirements. Since no single analysis pipeline is suitable for every project, N2Jenomics Lab Pvt. Ltd. develops customized bioinformatics workflows specifically designed to meet your research goals.

From experimental design consultation and raw data quality assessment to advanced statistical analysis, biological interpretation, and visualization, our experts support every stage of your project. We collaborate closely with academic institutions, healthcare organizations, biotechnology companies, and research laboratories to convert complex datasets into actionable biological insights, ensuring that every dataset delivers its maximum scientific value.

  • NGS data analysis workflow
bioinformatics services

(Roy et al. 2016)

General bioinformatics workflow for NGS data includes base calling (platform specific), demultiplexing (optional), sequence alignment, and variants calling.
  • Microarray data analysis workflow
bioinformaticsservices

(Afshari et al. 2010)

General bioinformatics workflow for microarray data includes data correction for background, normalization, gene expression patterns clustering, class prediction, and biological mechanism prediction.

 

Service Range

N2Jenomics Pvt. Ltd.' bioinformatics services cover a wide range of genomics applications, including but not limited to genomics, transcriptomics, epigenomics, and microarray.

 

Genomic Data Analysis (targeted, exome and whole genome sequencing)MetagenomicsTranscriptomic Data AnalysisEpigenomics Data AnalysisLong-Read Sequencing Data Analysis 
1. Disegno in silico of gene panel1. RNA16S sequencing1. Sequence quality checks1. Analysis of ChIP-Seq data (transcription factors, histones)1. Quality Control and Error Correction 
2. Sequence quality checks2. Identification of microbial communities' composition2. De-novo transcriptome assembly2. Analysis of bisulfite sequencing data (Methyl-Seq)2. Gene/Gene Isoform Expression 
3. De-novo genome assembly 3. Differential expression analysis of genes, isoforms and exons3. Differential methylation analysis in CpG and non-CpG regions3. Novel Gene Discovery and Full-Length Isoform Identification 
4. Sequence alignment versus reference genomes 4. Analysis of fusion genes, circularized RNAs and trans-splicing events4. HiC analysis4. De Novo Fusion Gene Detection and Fusion Isoform Expression Profiles 
5. Variant calling, annotation and prioritization (single samples, matched normal-tumor pairs, family trios) 5. Detection of long non-coding RNAs 5. Allele-Specific Expression and Haplotyping 
6. Gene-ontology and pathway enrichment analysis 6. Gene-ontology and pathway enrichment analysis 6. De Novo Genome Assembly 
7. Analysis of CNV and large rearrangements 7. Gene expression-dependent survival analysis 7. De Novo Transcriptome Assembly 
8. Clonal evolution and heterogeneity in cancer   8. Methylation Calling, Nucleosome Positioning, and Chromatin Accessibility 

 

Choose the Analysis Package That Best Fits Your Research

• Standard Bioinformatics Analysis

Our Standard Analysis package provides high-quality processed results generated using validated bioinformatics pipelines. The deliverables include essential analytical outputs such as annotated genetic variants, differentially expressed genes with statistical metrics, identified binding sites, methylation profiles, and other experiment-specific results. This option is ideal for researchers who require reliable, processed data for their own downstream interpretation and analysis.

• Advanced Bioinformatics Analysis

Our Advanced Analysis package goes beyond data processing by providing in-depth biological interpretation and expert consultation. Our bioinformatics specialists work closely with your research objectives, customize analytical workflows, perform project-specific analyses, interpret the biological significance of the findings, and recommend the most effective methods for data visualization and presentation. We also provide publication-ready figures, comprehensive reports, and expert insights to help maximize the impact of your research.

 

Why Choose N2Jenomics Lab Pvt. Ltd.?

  • • Customized Bioinformatics Workflows tailored to your research objectives.

  • • Multi-Platform Expertise supporting Illumina, Ion Torrent, PacBio SMRT, Oxford Nanopore, and major microarray technologies.
  • • Publication-Ready Results with high-quality figures, tables, and comprehensive reports.
  • • Integrated Genomics Solutions combining sequencing, microarray, statistical analysis, and bioinformatics under one roof.
  • • Experienced Scientific Team comprising skilled bioinformaticians, computational biologists, and genomics experts.
  • • Fast Turnaround Time with reliable, accurate, and reproducible analytical results.
  • • Comprehensive Data Interpretation to help transform complex genomic datasets into meaningful biological insights.

 

Talk to a scientist

Want more information about our bioinformatics services or interested in bioinformatics analysis of your raw high-throughput sequencing or microarray data? Please feel free to submit a service inquiry. We are here to help!

Address: Registered Office: 150, Patparganj Industrial Area, New Delhi – 110092, India
Email: info@n2jenomicslab.com
Phone: +91-8287121443 +91-9870548477
Operational Address: National Institute of Plant Genome Research (BRIC - NGGF) Lab No. 206 and 207, Aruna Asaf Ali Marg, P.O. Box No. 10531, New Delhi – 110067, India
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